MIDORI Reference 2


MIDORI is a reference database of DNA sequences, which can be used for taxonomic assignments of all eukaryota mitochondrial DNA sequences. Currently, the databases are available for download in five formats: RDP Classifier, the other with MOTHUR, QIIME, SPINGO, SINTAX.

New databases based on GenBank release 242 (as of February 2020) are available now  



Note: Since the version GB237, MIDORI reference 2 includes not only metazoans but also all eukaryota sequences. 

Since the version GB242, MIDORI reference 2 provides two types of databases, 1) including (_sp) and 2) not including sequences with uncertain species-level identity.    

Leray et al. (in prep.)